========
Data API
========

Classes
=======

``CyclicList`` class
--------------------

.. autoclass:: moldesign.data.CyclicList
    :members:
    :undoc-members:
    :show-inheritance:

Functions
=========

``print_environment`` function
------------------------------

.. autofunction:: moldesign.data.print_environment

Data
====

``ALL_BASES`` 
--------------

.. autoattribute:: moldesign.data.ALL_BASES

``AMINO_NAMES`` 
----------------

.. autoattribute:: moldesign.data.AMINO_NAMES

``ATOMIC_MASSES`` 
------------------

.. autoattribute:: moldesign.data.ATOMIC_MASSES

``ATOMIC_NUMBERS`` 
-------------------

.. autoattribute:: moldesign.data.ATOMIC_NUMBERS

``BACKBONES`` 
--------------

.. autoattribute:: moldesign.data.BACKBONES

``BASES`` 
----------

.. autoattribute:: moldesign.data.BASES

``BIOPOLYMER_TYPES`` 
---------------------

.. autoattribute:: moldesign.data.BIOPOLYMER_TYPES

``CHAIN_MONOMER_NAMES`` 
------------------------

.. autoattribute:: moldesign.data.CHAIN_MONOMER_NAMES

``COLOR_LIST`` 
---------------

.. autoattribute:: moldesign.data.COLOR_LIST

``DBASES`` 
-----------

.. autoattribute:: moldesign.data.DBASES

``DEFAULT_FORCE_TOLERANCE`` 
----------------------------

.. autoattribute:: moldesign.data.DEFAULT_FORCE_TOLERANCE

``ELEMENTS`` 
-------------

.. autoattribute:: moldesign.data.ELEMENTS

``IONS`` 
---------

.. autoattribute:: moldesign.data.IONS

``NUCLEIC_NAMES`` 
------------------

.. autoattribute:: moldesign.data.NUCLEIC_NAMES

``PACKAGEPATH`` 
----------------

.. autoattribute:: moldesign.data.PACKAGEPATH

``RBASES`` 
-----------

.. autoattribute:: moldesign.data.RBASES

``RESIDUE_BONDS`` 
------------------

.. autoattribute:: moldesign.data.RESIDUE_BONDS

``RESIDUE_DESCRIPTIONS`` 
-------------------------

.. autoattribute:: moldesign.data.RESIDUE_DESCRIPTIONS

``RESIDUE_ONE_LETTER`` 
-----------------------

.. autoattribute:: moldesign.data.RESIDUE_ONE_LETTER

``RESIDUE_TYPES`` 
------------------

.. autoattribute:: moldesign.data.RESIDUE_TYPES

``RESTYPES`` 
-------------

.. autoattribute:: moldesign.data.RESTYPES

``SYMBOLS`` 
------------

.. autoattribute:: moldesign.data.SYMBOLS

``_bondfilename`` 
------------------

.. autoattribute:: moldesign.data._bondfilename

``atnum`` 
----------

.. autoattribute:: moldesign.data.atnum

``b`` 
------

.. autoattribute:: moldesign.data.b

``base`` 
---------

.. autoattribute:: moldesign.data.base

``color_rotation`` 
-------------------

.. autoattribute:: moldesign.data.color_rotation

``mass`` 
---------

.. autoattribute:: moldesign.data.mass

``name`` 
---------

.. autoattribute:: moldesign.data.name

``namelist`` 
-------------

.. autoattribute:: moldesign.data.namelist

``resname`` 
------------

.. autoattribute:: moldesign.data.resname

``typename`` 
-------------

.. autoattribute:: moldesign.data.typename