All modules for which code is available
- collections
- moldesign.chemjson
- moldesign.compute.compute
- moldesign.compute.configuration
- moldesign.compute.runsremotely
- moldesign.data
- moldesign.exceptions
- moldesign.fileio
- moldesign.forcefields.forcefield
- moldesign.forcefields.terms
- moldesign.geom.constraints
- moldesign.geom.coords
- moldesign.geom.grads
- moldesign.geom.monitor
- moldesign.geom.setcoord
- moldesign.geom.shake
- moldesign.geom.symmetry
- moldesign.helpers.helpers
- moldesign.helpers.pdb
- moldesign.integrators.base
- moldesign.integrators.openmm
- moldesign.integrators.verlet
- moldesign.interfaces.ambertools
- moldesign.interfaces.biopython_interface
- moldesign.interfaces.nbo_interface
- moldesign.interfaces.openbabel
- moldesign.interfaces.openmm
- moldesign.interfaces.opsin_interface
- moldesign.interfaces.parmed_interface
- moldesign.interfaces.pdbfixer_interface
- moldesign.interfaces.pyscf_interface
- moldesign.interfaces.qtrfit
- moldesign.interfaces.symmol_interface
- moldesign.mathutils
- moldesign.method
- moldesign.min.base
- moldesign.min.descent
- moldesign.min.scipy
- moldesign.min.smart
- moldesign.models.amber
- moldesign.models.base
- moldesign.models.models
- moldesign.models.openmm
- moldesign.models.pyscf
- moldesign.models.sqm
- moldesign.models.toys
- moldesign.molecules.atomcollections
- moldesign.molecules.atoms
- moldesign.molecules.biounits
- moldesign.molecules.bonds
- moldesign.molecules.chain
- moldesign.molecules.coord_arrays
- moldesign.molecules.molecule
- moldesign.molecules.residue
- moldesign.molecules.trajectory
- moldesign.orbitals.basis
- moldesign.orbitals.gaussians
- moldesign.orbitals.orbitals
- moldesign.orbitals.wfn
- moldesign.parameters
- moldesign.tools.build
- moldesign.tools.topology
- moldesign.uibase.components
- moldesign.uibase.logwidget
- moldesign.uibase.plotting
- moldesign.uibase.selector
- moldesign.units.quantity
- moldesign.units.tools
- moldesign.units.unitsystem
- moldesign.utils.callsigs
- moldesign.utils.classes
- moldesign.utils.databases
- moldesign.utils.docparsers.google
- moldesign.utils.utils
- moldesign.viewer.bondclicker
- moldesign.viewer.common
- moldesign.viewer.viewer2d
- moldesign.viewer.viewer3d
- moldesign.widgets.computeconfig
- moldesign.widgets.configurator
- moldesign.widgets.geombuilder
- moldesign.widgets.orbitals
- moldesign.widgets.parameterization
- moldesign.widgets.selection
- moldesign.widgets.symmetry
- moldesign.widgets.trajectory
- pint.quantity
- traitlets.traitlets